Cold Method 1 Adults 4day
Dm Treatment Expression RNA-seq Cold treatment_Method 1_Four Day Adults uniquely mapping reads Dmel r5 alignment (Celniker project, Graveley subgroup)
Reads sequenced from stranded RNA libraries made from Oregon-R Drosophila melanogaster Cold treatment Method 1 Four Day Adults were aligned to the D. melanogaster r5 genome using Bowtie and to predicted splice junctions using SPA, retaining only uniquely mapped reads. Tracks show read alignments and density.
RNA-seq analysis was performed on poly(A)+ RNA from D. melanogaster treated with various chemicals through feeding, subjected to temperature shock, or exposure to viruses. Stranded reads from Illumina GAIIx and HiSeq sequencing were aligned to the D. melanogaster r5 genome using Bowtie (Langmead, 2010) and SPA (Graveley et al., 2011)
Related modENCODE submissions:
Release Date: 2012-02-07